I needed to update mysql to use the old authentication mechanism...
http://dev.mysql.com/doc/refman/5.0/en/old-client.html
This involved adding some command line parameters to mysqld when it starts to use the old authentication mechanism. Unfortunately the Windows Services tool doesn't allow this.
Thanks to http://illiniguy.wordpress.com/2006/03/17/updating-a-windows-service/
regedit to
\\HKEY_LOCAL_MACHINE\SYSTEMCurrentControlSet\Services\___YOUR_SERVICE_NAME___
and edit away...
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